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View Structure Prediction Details

Protein: gi|25372754, gi|...
Organism: Arabidopsis thaliana
Length: 163 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25372754, gi|....

Description E-value Query
Range
Subject
Range
gi|6714532, gi|2... - gi|6714532|dbj|BAA89480.1| pectin methylesterase [Salix gilgiana], pir||T52331 pectinesterase (EC 3....
128.0 [0..30] [162..81]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRNTIQMY LTTVVAIVIL LAASQATEAR FTSLCAQTAY PTLCRPLVKG PNPRRATHST  60
   61 IRALEAKTKL AITDSARFKS GNPTVAICYA TLVDASFNLR RARTSIRKRN VMMLKMFLTA 120
  121 AVSDYGVCVN GFIDSHQVNT LQNDVDELRK MGTNCLLLAT LIR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.30103
Match: 1xg2B
Description: Crystal structure of the complex between pectin methylesterase and its inhibitor protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle