| Protein: | gi|25294085, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 365 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25294085, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
259.0 | [0..1] | [359..1] |
|
|
231.0 | [0..1] | [358..1] |
|
|
230.0 | [0..1] | [336..1] |
|
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222.0 | [0..1] | [262..1] |
|
|
221.0 | [0..3] | [338..81] |
|
Region A: Residues: [1-118] |
1 11 21 31 41 51
| | | | | |
1 MGRSPCCDEN GLKKGPWTPE EDQKLIDYIH KHGHGSWRAL PKLADLNRCG KSCRLRWTNY 60
61 LRPDIKRGKF SAEEEQTILH LHSILGNKWS AIATHLQGRT DNEIKNFWNT HLKKKLIQ
|
| Detection Method: |  |
| Confidence: | 42.69897 |
| Match: | 1h88C |
| Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [119-255] |
1 11 21 31 41 51
| | | | | |
1 MGIDPVTHQP RTDLFASLPQ LIALANLKDL IEQTSQFSSM QGEAAQLANL QYLQRMFNSS 60
61 ASLTNNNGNN FSPSSILDID QHHAMNLLNS MVSWNKDQNP AFDPVLELEA NDQNQDLFPL 120
121 GFIIDQPTQP LQQQKYH
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.758 | a.24.19 | Description not found. |
| View | Download | 0.634 | a.216.1 | Description not found. |
| View | Download | 0.615 | a.29.13 | Description not found. |
| View | Download | 0.603 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.564 | a.160.1 | Poly(A) polymerase, middle domain |
| View | Download | 0.449 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.438 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.436 | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.426 | a.47.2 | t-snare proteins |
| View | Download | 0.387 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.322 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.288 | a.168.1 | GEF domain of SopE toxin |
| View | Download | 0.232 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.217 | a.7.8 | GAT domain |
|
Region A: Residues: [256-365] |
1 11 21 31 41 51
| | | | | |
1 LNNSPSELPS QGDPLLDHVP FSLQTPLNSE DHFIDNLVKH PTDHEHEHDD NPSSWVLPSL 60
61 IDNNPKTVTS SLPHNNPADA SSSSSYGGCE AASFYWPDIC FDESLMNVIS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.425 | N/A | N/A | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.314 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.301 | N/A | N/A | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.301 | N/A | N/A | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.297 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.297 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.278 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.278 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.253 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.253 | N/A | N/A | a.118.8 | TPR-like |
