| Protein: | NCED5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 589 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NCED5_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
743.0 | [0..1] | [589..1] |
|
Region A: Residues: [1-106] |
1 11 21 31 41 51
| | | | | |
1 MACSYILTPN PTKLNLSFAP SDLDAPSPSS SVSFTNTKPR RRKLSANSVS DTPNLLNFPN 60
61 YPSPNPIIPE KDTSRWNPLQ RAASAALDFA ETALLRRERS KPLPKT
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [107-589] |
1 11 21 31 41 51
| | | | | |
1 VDPRHQISGN YAPVPEQSVK SSLSVDGKIP DCIDGVYLRN GANPLFEPVS GHHLFDGDGM 60
61 VHAVKITNGD ASYSCRFTET ERLVQEKQLG SPIFPKAIGE LHGHSGIARL MLFYARGLFG 120
121 LLNHKNGTGV ANAGLVYFHD RLLAMSEDDL PYQVRVTDNG DLETIGRFDF DGQLSSAMIA 180
181 HPKIDPVTKE LFALSYDVVK KPYLKYFKFS PEGEKSPDVE IPLASPTMMH DFAITENFVV 240
241 IPDQQVVFKL SDMFLGKSPV KYDGEKISRF GILPRNAKDA SEMVWVESPE TFCFHLWNAW 300
301 ESPETDEVVV IGSCMTPADS IFNECDEQLN SVLSEIRLNL KTGKSTRRTI IPGSVQMNLE 360
361 AGMVNRNLLG RKTRYAYLAI AEPWPKVSGF AKVDLSTGEV KNHFYGGKKY GGEPFFLPRG 420
421 LESDGEDDGY IMSFVHDEES WESELHIVNA VTLELEATVK LPSRVPYGFH GTFVNSADML 480
481 NQA
|
| Detection Method: | |
| Confidence: | 118.0 |
| Match: | 2biwA |
| Description: | Crystal structure of apocarotenoid cleavage oxygenase from Synechocystis, native enzyme |
Matching Structure (courtesy of the PDB): |
|
