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View Structure Prediction Details

Protein: NDUA9_ARATH
Organism: Arabidopsis thaliana
Length: 402 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NDUA9_ARATH.

Description E-value Query
Range
Subject
Range
gi|41205692 - gi|41205692|gb|AAR99612.1| dTDP-glucose 4,6-dehydratase [Geobacillus stearothermophilus]
271.0 [0..67] [393..1]

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Predicted Domain #1
Region A:
Residues: [1-65]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVVSRRLVQ RPLVGGASIY SSSSLRSLYG VSNHLNGTDN CRYSSSLATK GVGHLARKGT  60
   61 GGRSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.69897
Match: 2z5lA
Description: No description for 2z5lA was found.

Predicted Domain #2
Region A:
Residues: [66-402]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSGIVATVFG ATGFLGRYLV QQLAKMGSQV LVPFRGSEDS PRHLKLMGDL GQVVPMKFDP  60
   61 RDEDSIKAVM AKANVVINLI GREYETRNFS FEDANHHIAE KLALVAKEHG GIMRYIQVSC 120
  121 LGASVSSPSR MLRAKAAAEE AVLNALPEAT IMRPATMIGT EDRILNPWSM FVKKYGFLPL 180
  181 IGGGTTKFQP VYVVDVAAAI VAALKDDGSS MGKTYELGGP DVFTTHELAE IMYDMIREWP 240
  241 RYVKLPFPIA KAMAAPRDFM VNKVPFPLPS PQIFNLDQIN ALTTDTLVSD NALKFQDLDL 300
  301 VPHKLKGYPV EFLIQYRKGG PNFGSTVSEK IPTDFYP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.69897
Match: 2hunA
Description: No description for 2hunA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle