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View Structure Prediction Details

Protein: MCC1_ARATH
Organism: Arabidopsis thaliana
Length: 247 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MCC1_ARATH.

Description E-value Query
Range
Subject
Range
gi|44681356, gi|... - gi|45773876|gb|AAS76742.1| At5g16800 [Arabidopsis thaliana], gi|44681356|gb|AAS47618.1| At5g16800 [A...
185.0 [0..1] [247..1]

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Predicted Domain #1
Region A:
Residues: [1-247]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRFPRRFID DSSMEDAGIS LCPSIHYRPI NPNDLDRLEQ IHRDIFPIKY ESEFFQSVVN  60
   61 GVDIVSWAAV DRSRPDDHSD ELIGFVTAKF VLAKDSEIDD LIHYDSSKGE ETLIYILTLG 120
  121 VVETYRNRGI AMSLISEVIK YASGLSVCRG VYLHVIAHNN AAICLYKRLM FRCVRRLHGF 180
  181 YLINRHHFDA FLFVYFINGS RTPCSPLEVA MFVVNYMKSG IKSVASKLAN KDEKGLKWLF 240
  241 CKDTDCV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.522879
Match: 1yr0A
Description: Crystal structure of phosphinothricin acetyltransferase from agrobacterium tumefaciens
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.44927632341056 bayes_pls_golite062009
transferase activity 1.29638283412179 bayes_pls_golite062009
transferase activity, transferring acyl groups 1.25574147031095 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 1.14025367092848 bayes_pls_golite062009
acyltransferase activity 1.11249291357784 bayes_pls_golite062009
N-acyltransferase activity 0.756613127653639 bayes_pls_golite062009
acetyltransferase activity 0.71069229070011 bayes_pls_golite062009
N-acetyltransferase activity 0.4223042426612 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle