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View Structure Prediction Details

Protein: STLP2_ARATH
Organism: Arabidopsis thaliana
Length: 393 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STLP2_ARATH.

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
459.0 [0..1] [392..1198]

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Predicted Domain #1
Region A:
Residues: [1-393]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANQSTETNQ PSNMQTYGVP IYAADWIPEV DVRSKIIMDP EKSEDDDESS SSSSSSRSCI  60
   61 VLSGGGGEGR SGISNVILIC RVDLNTNSLS EQPLGRLVVG SDLPYRMAVH PREGGLICAL 120
  121 PNSCKLFHWE DIMSREDNQA GESEEVIKEL RDVGQQLALA FNPEGSVLAA GAEDGTLRVF 180
  181 KWPSMNTLLN ESQAHSSVKC LTFSESGQFL VSLGGPVCRV WDVNASAAVA SLSKEKDEMF 240
  241 ASCRFSVDSA GNEVLYIAAN TERGGSIITC DTKLWKRKWS KPIKKNSISA FNVSADGKLL 300
  301 AIGTLEGDVL ILESTRMQTI QVVKKAHLGL VTALTFSPDS RGLVSVSFDS RARLTMIEQK 360
  361 GDKPGVRWWL LVLLIVLLYV VAYYYMKAKG IIP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.39794
Match: 2ovpB
Description: No description for 2ovpB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle