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View Structure Prediction Details

Protein: ACD11_ARATH
Organism: Arabidopsis thaliana
Length: 206 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACD11_ARATH.

Description E-value Query
Range
Subject
Range
gi|62733540, gi|... - gi|62733540|gb|AAX95657.1| hypothetical protein [Oryza sativa (japonica cultivar-group)], gi|1154548...
gi|125545465 - gi|125545465|gb|EAY91604.1| hypothetical protein OsI_012837 [Oryza sativa (indica cultivar-group)]
221.0 [0..7] [206..34]

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Predicted Domain #1
Region A:
Residues: [1-206]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADSEADKPL RKISAAFKKL AIIVNSPNPE VPVTQFSHAC SLVSPLFGCL GIAFKFAEMD  60
   61 YVAKVDDLVR ASSSISTLVV MMDKDIEADC VRKAGSHTRN LLRVKRGLDM VKVLFEQIIA 120
  121 SEGDNSLKDP ATKSYAQVFA PHHGWAIRKA VSLGMYALPT RAHLLNMLKE DEAAAKIHMQ 180
  181 SYVNSSAPLI TYLDNLFLSK QLGIDW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.0
Match: 1tfjA
Description: Crystal structure of Bovine Glycolipid transfer protein in complex with a fatty acid
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle