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View Structure Prediction Details

Protein: AHL22_ARATH
Organism: Arabidopsis thaliana
Length: 317 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AHL22_ARATH.

Description E-value Query
Range
Subject
Range
gi|6633838 - gi|6633838|gb|AAF19697.1|AC008047_4 F2K11.15 [Arabidopsis thaliana]
209.0 [0..3] [304..410]

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Predicted Domain #1
Region A:
Residues: [1-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQVSRSLPP PFLSRDLHLH PHHQFQHQQQ QQQQNHGHDI DQHRIGGLKR DRDADIDPNE  60
   61 HSSAGKDQST PGSGGESGGG GGGDNHITRR PRGRPAGSKN KPKPPIIITR DSANAL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [117-317]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSHVMEVANG CDVMESVTVF ARRRQRGICV LSGNGAVTNV TIRQPASVPG GGSSVVNLHG  60
   61 RFEILSLSGS FLPPPAPPAA SGLTIYLAGG QGQVVGGSVV GPLMASGPVV IMAASFGNAA 120
  121 YERLPLEEDD QEEQTAGAVA NNIDGNATMG GGTQTQTQTQ QQQQQQLMQD PTSFIQGLPP 180
  181 NLMNSVQLPA EAYWGTPRPS F

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.69897
Match: 2nmuA
Description: No description for 2nmuA was found.

Predicted functions:

Term Confidence Notes
catalytic activity 0.210430303475354 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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