| Protein: | FTSH4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 717 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FTSH4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
475.0 | [0..188] | [701..115] |
|
Region A: Residues: [1-211] |
1 11 21 31 41 51
| | | | | |
1 MAWRRIITKV SSHERELSSL RSLLVRAYSS FPRVGVTGAV GGGGASLPRT RFQSSYVGSF 60
61 ARRVRDREEV NEVAHLRELI RRNDPEAVIR MFESQPSLHA NASALSEYIK ALVKVDRLDQ 120
121 SELVRTLQRG IAGVAREEET FGGLGAFRNV GKPTKDGVLG TASAPIHTIS TERTHFKEQL 180
181 WSTIRTIGVG FLLISGIGAL IEDRGIGKGL G
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [212-474] |
1 11 21 31 41 51
| | | | | |
1 LHEEVQPSMD SSTKFSDVKG VDEAKAELEE IVHYLRDPKR FTRLGGKLPK GVLLVGPPGT 60
61 GKTMLARAIA GEAGVPFFSC SGSEFEEMFV GVGARRVRDL FSAAKKCSPC IIFIDEIDAI 120
121 GGSRNPKDQQ YMKMTLNQML VELDGFKQNE GIIVVAATNF PESLDKALVR PGRFDRHIVV 180
181 PNPDVEGRRQ ILESHMSKVL KAEDVDLMII ARGTPGFSGA DLANLVNVAA LKAAMDGSKD 240
241 VTMSDLEFAK DRIMMGSERK SAV
|
| Detection Method: | |
| Confidence: | 70.0 |
| Match: | 1lv7A |
| Description: | AAA domain of cell division protein FtsH |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.470983068319171 | bayes_pls_golite062009 |
| hydrolase activity | 0.0582794297634999 | bayes_pls_golite062009 |
|
Region A: Residues: [475-529] |
1 11 21 31 41 51
| | | | | |
1 ISDESRKLTA FHEGGHALVA IHTEGALPVH KATIVPRGMA LGMVSQLPDK DETSI
|
| Detection Method: | |
| Confidence: | 4.09 |
| Match: | 2di4A |
| Description: | No description for 2di4A was found. |
|
Region A: Residues: [530-717] |
1 11 21 31 41 51
| | | | | |
1 SRKQMLARLD VCMGGRVAEE LIFGESEVTS GASSDLEQAT KLARAMVTKF GMSKEVGLVA 60
61 HNYDDNGKSM STETRLLIES EVKQLLEKAY NNAKTILTVY NKELHALANA LLQHETLSGK 120
121 QIKELLTDLN SPLLQKRQEV VTKQSNPVPP STPSSASSAA AAAAAAAAAA AAAAATAATK 180
181 GKDMAPVS
|
| Detection Method: | |
| Confidence: | 114.0 |
| Match: | 2ce7A |
| Description: | EDTA treated |
Matching Structure (courtesy of the PDB): |
|
