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View Structure Prediction Details

Protein: Y3028_ARATH
Organism: Arabidopsis thaliana
Length: 443 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y3028_ARATH.

Description E-value Query
Range
Subject
Range
gi|83853812 - gi|83853812|gb|ABC47845.1| N-hydroxycinnamoyl/benzoyltransferase 3 [Glycine max]
304.0 [0..1] [439..28]

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Predicted Domain #1
Region A:
Residues: [1-443]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADVTFISSS IVRPQIINQE GREKIHLTPF DLNLLYVDYT QRGLLFPKPD PETHFISRLR  60
   61 TSLSSALDIY FPFAGRLNKV ENHEDETVSF YINCDGSGAK FIHAVSDSVS VSDLLRPDGS 120
  121 VPDFFRIFYP MNGVKSIDGL SEPLLALQVT EMRDGVFIGF GYNHMVADGA SIWNFFRTWS 180
  181 KICSNGQREN LQPLALKGLF VDGMDFPIHI PVSDTETSPP SRELSPTFKE RVFHFTKRNI 240
  241 SDLKAKVNGE IGLRDHKVSS LQAVSAHMWR SIIRHSGLNQ EEKTRCFVAV DLRQRLNPPL 300
  301 DKECFGHVIY NSVVTTTVGE LHDQGLGWAF LQINNMLRSL TNEDYRIYAE NWVRNMKIQK 360
  361 SGLGSKMTRD SVIVSSSPRF EVYDNDFGWG KPIAVRAGPS NSISGKLVFF RGIEEGCIDV 420
  421 HAFLLPDVLV KLLADVEFLE KCG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.30103
Match: 2bghA
Description: Crystal structure of Vinorine Synthase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle