YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|7435399, gi|2...
Organism: Arabidopsis thaliana
Length: 402 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7435399, gi|2....

Description E-value Query
Range
Subject
Range
gi|50509106, gi|... - gi|50935127|ref|XP_477091.1| putative polygalacturonase PG1 [Oryza sativa (japonica cultivar-group)]...
312.0 [0..1] [402..1]

Back

Predicted Domain #1
Region A:
Residues: [1-402]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACIAFVLKA LCLSLLLIVV ASRSTIRPKV FNVQRHGSKP DGKTDNTNAF TSIWSRACKR  60
   61 ISGSSKIYVP KGTFYLGGVE FVGPCKNPIE FIIDGTLLAP ANPNDIKQDT WINFRYINNL 120
  121 SISGSGTLDG QGKQSWPLND CHKNPNCPKL AISMGFAFVN NSNIKDITSL NSKMGHFNFF 180
  181 FVHHFNITGV TITAPSDSPN TDGIKMGSCS NIQISNTNIG TGDDCIAILS GTTKLNISNI 240
  241 NCGPGHGISV GSLGKNKDEK DVKDLFVRDV IFNGTSDGIR IKTWESSASK ILVSNFVYEN 300
  301 IQMIDVGKPI NIDQKYCPHP PCEHERKSHV QIQDLKLKNI YGTSKNKVAV NLQCSKSFPC 360
  361 KNVELIDINI KQNGLEDGSS ITVCENVDGF ARGKMFPQHC LN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.0
Match: 2uveA
Description: No description for 2uveA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle