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View Structure Prediction Details

Protein: gi|15239497, gi|...
Organism: Arabidopsis thaliana
Length: 639 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15239497, gi|....

Description E-value Query
Range
Subject
Range
gi|222615549, gi... - gi|222615549|gb|EEE51681.1| hypothetical protein OsJ_33035 [Oryza sativa Japonica Group], gi|2156947...
gi|218185284 - gi|218185284|gb|EEC67711.1| hypothetical protein OsI_35189 [Oryza sativa Indica Group]
613.0 [0..6] [634..4]

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Predicted Domain #1
Region A:
Residues: [1-639]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEFDSKVPV SGMNNHVFEA CHHVVKALRA SDNNLDANLR KLLSDLEMHL STFGIADTKV  60
   61 EDAGFSEIKK RFKEAVKRIR SWETNQSTMF EAGLSEADQF FQALYDVQTV LVGFKALPMK 120
  121 TNQMEKDVYN QATVALDIAM LRLEKELCDV LHQHKRHVQP DYLAVSSRRK DIVYDESFVS 180
  181 LDDEVIVEAS SHEDDEQISD FYNSDLVDPI VLPHIKAIAN AMFACEYDQP FCEAFIGVQR 240
  241 EALEEYMVTL EMERFSCVDV LRMDWEDLNG AMRKWTKVVK IITQVYLASE KQLCDQILGD 300
  301 FESISTACFI EISKDAILSL LNFGEAVVLR SCKPEMLERF LSMYEVSAEI LVDVDNLFPD 360
  361 ETGSSLRIAF HNLSKKLADH TTTTFLKFKD AIASDESTRP FHGGGIHHLT RYVMNYLKLL 420
  421 PEYTDSLNSL LQNIHVDDSI PEKTGEDVLP STFSPMARHL RSIVTTLESS LERKAQLYAD 480
  481 EALKSIFLMN NFRYMVQKVK GSELRRLFGD EWIRKHIASY QCNVTNYERS TWSSILALLR 540
  541 DNNDSVRTLR ERCRLFSLAF DDVYKNQTRW SVPDSELRDD LHISTSVKVV QSYRGFLGRN 600
  601 AVRIGEKHIR YTCEDIENML LDLFECLPSP RSLRSSRKR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 120.0
Match: 2pftA
Description: No description for 2pftA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle