| Protein: | gi|7428019, gi|7... |
| Organism: | Arabidopsis thaliana |
| Length: | 772 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7428019, gi|7....
| Description | E-value | Query Range |
Subject Range |
|
|
754.0 | [0..1] | [772..18] |
|
Region A: Residues: [1-156] |
1 11 21 31 41 51
| | | | | |
1 MEATNVLHLL IISLFSTILL AQATDILIAN QTLKDGDTIV SQGGSRNRYL GIWYKKISLQ 60
61 TVVWVANRDS PLYDLSGTLK VSENGSLCLF NDRNHIIWSS SSSPSSQKAS LRNPIVQILD 120
121 TGNLVVRNSG DDQDYIWQSL DYPGDMFLPG MKYGLN
|
| Detection Method: |  |
| Confidence: | 5.30103 |
| Match: | 1jpcA |
| Description: | MANNOSE-SPECIFIC AGGLUTININ (LECTIN) FROM SNOWDROP (GALANTHUS NIVALIS) BULBS IN COMPLEX WITH MANNOSE-ALPHA1,6-(MANNOSE-ALPHA1,3)-MANNOSE-ALPHA1,6-(MANNOSE-ALPHA1,3)-MANNOSE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin filament binding | 2.7771710692638 | bayes_pls_golite062009 |
| actin binding | 2.66586425447795 | bayes_pls_golite062009 |
| binding | 2.263388192549 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.19184637590378 | bayes_pls_golite062009 |
| actin monomer binding | 1.85013124890101 | bayes_pls_golite062009 |
| protein binding | 0.871734119777931 | bayes_pls_golite062009 |
| protein dimerization activity | 0.67926635764405 | bayes_pls_golite062009 |
| protein homodimerization activity | 0.517294200148393 | bayes_pls_golite062009 |
| identical protein binding | 0.255628153449911 | bayes_pls_golite062009 |
|
Region A: Residues: [157-286] |
1 11 21 31 41 51
| | | | | |
1 FVTGLNRFLT SWRAIDDPST GNYTNKMDPN GVPQFFLKKN SVVVFRTGPW NGLRFTGMPN 60
61 LKPNPIYRYE YVFTEEEVYY TYKLENPSVL TRMQLNPNGA LQRYTWVDNL QSWNFYLSAM 120
121 MDSCDQYTLC
|
| Detection Method: | |
| Confidence: | 1.43 |
| Match: | 1dlpA |
| Description: | Fetuin-binding protein Scafet precursor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 2.39855182962596 | bayes_pls_golite062009 |
| actin filament binding | 2.39211243341836 | bayes_pls_golite062009 |
| binding | 2.23778052962551 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.97518142562745 | bayes_pls_golite062009 |
| actin monomer binding | 1.28767551463066 | bayes_pls_golite062009 |
| protein binding | 0.832677135589694 | bayes_pls_golite062009 |
| protein dimerization activity | 0.478532181782275 | bayes_pls_golite062009 |
| protein homodimerization activity | 0.283266648265501 | bayes_pls_golite062009 |
| identical protein binding | 0.0693591022858944 | bayes_pls_golite062009 |
|
Region A: Residues: [287-403] |
1 11 21 31 41 51
| | | | | |
1 GSYGSCNINE SPACRCLKGF VAKTPQAWVA GDWSEGCVRR VKLDCGKGED GFLKISKLKL 60
61 PDTRTSWYDK NMDLNECKKV CLRNCTCSAY SPFDIRDGGK GCILWFGDLI DIREYNE
|
| Detection Method: | |
| Confidence: | 1.3 |
| Match: | 1nfuB |
| Description: | Factor X, N-terminal module |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [404-772] |
1 11 21 31 41 51
| | | | | |
1 NGQDLYVRLA SSEIETLQRE SSRVSSRKQE EEDLELPFLD LDTVSEATSG FSAGNKLGQG 60
61 GFGPVYKGTL ACGQEVAVKR LSRTSRQGVE EFKNEIKLIA KLQHRNLVKI LGYCVDEEER 120
121 MLIYEYQPNK SLDSFIFDKE RRRELDWPKR VEIIKGIARG MLYLHEDSRL RIIHRDLKAS 180
181 NVLLDSDMNA KISDFGLART LGGDETEANT TRVVGTYGYM SPEYQIDGYF SLKSDVFSFG 240
241 VLVLEIVSGR RNRGFRNEEH KLNLLGHAWR QFLEDKAYEI IDEAVNESCT DISEVLRVIH 300
301 IGLLCVQQDP KDRPNMSVVV LMLSSEMLLL DPRQPGFFNE RNLLFSDTVS INLEIPSNNF 360
361 QTMSVIDPR
|
| Detection Method: | |
| Confidence: | 68.69897 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
