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View Structure Prediction Details

Protein: VATO2_ARATH
Organism: Arabidopsis thaliana
Length: 178 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VATO2_ARATH.

Description E-value Query
Range
Subject
Range
gi|50751470 - gi|50751470|ref|XP_422414.1| PREDICTED: similar to ATPase, H+ transporting, V0 subunit B; ATPase, H+...
173.0 [0..6] [177..180]

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Predicted Domain #1
Region A:
Residues: [1-178]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGVAIHASS WGAALVRISP YTFSAIGIAI SIGVSVLGAA WGIYITGSSL IGAAIEAPRI  60
   61 TSKNLISVIF CEAVAIYGVI VAIILQTKLE SVPSSKMYDA ESLRAGYAIF ASGIIVGFAN 120
  121 LVCGLCVGII GSSCALSDAQ NSTLFVKILV IEIFGSALGL FGVIVGIIMS AQATWPTK

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Detection Method: PSI-BLAST
Confidence: 22.522879
Match: 2bl2A
Description: The membrane rotor of the V-type ATPase from Enterococcus hirae
Matching Structure (courtesy of the PDB):

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