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View Structure Prediction Details

Protein: PUP3_ARATH
Organism: Arabidopsis thaliana
Length: 351 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUP3_ARATH.

Description E-value Query
Range
Subject
Range
gi|109123815 - gi|109123815|ref|XP_001113968.1| PREDICTED: similar to solute carrier family 35, member E1 [Macaca m...
154.0 [0..18] [346..321]

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Predicted Domain #1
Region A:
Residues: [1-63]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKALVIINC IILAIGNCGG PLIMRLYFNN GGKRIWFSTF LETAGFPVIF IPLLFSYITR  60
   61 RRS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [64-198]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NNVGDSTSFF LIKPRLLIAA VIVGILSGFD NYLYAYGIAY LPVSTAALII ASQLAFIAIF  60
   61 SFFMVKHKFT PFTINAVVLL TVGAAVLGMH TETDKPVHET HKQYITGFLI TVAAAVMYAF 120
  121 ILPLVELAYQ KAKQT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.21
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [199-351]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYTLVLEFQ LILCLLASIV SVIGMFIAGD FKALPKEARE FKLGEALFYV VAVFSAIIWQ  60
   61 GFFLGAIGLI FSTSSLVSGI MISVLLPITE VLAVIFYHEK FQAEKGLSLA LSLWGFVSYF 120
  121 YGEIKSGEDK RRIQQEESQE TEQSSLSRPI SEC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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