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View Structure Prediction Details

Protein: FB277_ARATH
Organism: Arabidopsis thaliana
Length: 403 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FB277_ARATH.

Description E-value Query
Range
Subject
Range
FB278_ARATH - Putative F-box protein At5g41510 OS=Arabidopsis thaliana GN=At5g41510 PE=3 SV=1
224.0 [0..1] [397..1]

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Predicted Domain #1
Region A:
Residues: [1-403]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTISNLPR ELIEEILSRV PLRAMKAMRL TCKSWNNLSK SESFMKMHIG KAATREEKTM  60
   61 MVAVMPHTLA LVSVVVDGVN PSTELKGQFS FLDKEFFIYR VIHYEGLLLC ILKDATRIVV 120
  121 WNPYLGQERW IQIRYSHRPH GVDHFKYAVG YADKVSCRSV KLLRFLDYFH KASDKPFFWY 180
  181 EIYDFDSCLW TTLDITPHWG ISWTYPRVSL KGNTYWPARE MNTKGFQDHI ICFDFTSERF 240
  241 GPLLPLPRAQ GCHVSLSCVK EEKLAVLLKH RLHHDSYEYE FEIWITTKID VEMVSWSKFL 300
  301 RMDMRPKIKL PLSFYVDEEK KVFMGFDHGE YPKLFLNIIG ETGFLRKLDL GVHEGHRSPC 360
  361 SYVPSLVQIK HPAGDKMIKQ SSLEDRRFAQ NSLRLAAIEK LIN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.154902
Match: 1p22A
Description: F-box/WD-repeat protein 1 (beta-TRCP1)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle