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View Structure Prediction Details

Protein: CDG1_ARATH
Organism: Arabidopsis thaliana
Length: 432 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDG1_ARATH.

Description E-value Query
Range
Subject
Range
gi|29467647 - gi|29467647|dbj|BAC67214.1| protein kinase CDG1 [Arabidopsis thaliana]
391.0 [0..1] [432..1]

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Predicted Domain #1
Region A:
Residues: [1-432]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSCLCFRPS RKTKLKDKSH KRSIRNQTSS SSAQPAGTAK EVDSSSSQTV VQDSSRYRCQ  60
   61 IFSYRELAIA TNSFRNESLI GRGGFGTVYK GRLSTGQNIA VKMLDQSGIQ GDKEFLVEVL 120
  121 MLSLLHHRNL VHLFGYCAEG DQRLVVYEYM PLGSVEDHLY DLSEGQEALD WKTRMKIALG 180
  181 AAKGLAFLHN EAQPPVIYRD LKTSNILLDH DYKPKLSDFG LAKFGPSDDM SHVSTRVMGT 240
  241 HGYCAPEYAN TGKLTLKSDI YSFGVVLLEL ISGRKALMPS SECVGNQSRY LVHWARPLFL 300
  301 NGRIRQIVDP RLARKGGFSN ILLYRGIEVA FLCLAEEANA RPSISQVVEC LKYIIDHTIR 360
  361 KERRTRRRLL GGNKDGAGTS RSPDETMMRM LEEEEEYVTS EEAIERRRVI VDDARTWAGM 420
  421 NRRGATPPTP TP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 75.69897
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle