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View Structure Prediction Details

Protein: gi|10177401, gi|...
Organism: Arabidopsis thaliana
Length: 547 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10177401, gi|....

Description E-value Query
Range
Subject
Range
gi|222615549, gi... - gi|222615549|gb|EEE51681.1| hypothetical protein OsJ_33035 [Oryza sativa Japonica Group], gi|2156947...
gi|218185284 - gi|218185284|gb|EEC67711.1| hypothetical protein OsI_35189 [Oryza sativa Indica Group]
572.0 [0..5] [546..50]

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Predicted Domain #1
Region A:
Residues: [1-547]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNVLDKTNL HELSIAPKIS THDEKLYECT KCGIFFHRDS VESATEINPH ENLGEVRAVE  60
   61 DKPNNESIKV DERGTCNFHF IDEHHGKVDG INTEYDASKF KQILENYSKL TEPNQLFECL 120
  121 PSNLRPPSDD EGSDGKSHDP QSNGLGKTDY TVPTIIPPTV LPVLHDLAQQ MVKAGHQQEL 180
  181 FKTYRDIRRA VLAQSLEKLG VERHSKYDVE RMNQDVFEAK IMNWIHYIRI SVKLLFAAEK 240
  241 EICHQILDGV EPFRDQSFAE ITTISFGMLL SFGYAIAISR RSPEKVFVIL DMYEIMIELQ 300
  301 PEFELIFGSK PCTEMKEDAL NLTKLLAQTV KETIADFEVA IEMDATETVV MDGSVHALTS 360
  361 YVARYVKFLF DYEPTLRQLF QEFNSNDPDT KLKSVMTGIM RALRNNLDGK SRQFEDAALT 420
  421 QLFLMNNVYY IILQCITVQS SKSGLIKNES IKKTLVKEKF KTFNSQFEEL HQRQCQWSVS 480
  481 DVELRESLRL AIAEVLLPAY GSFLKRFGPM IESGKNSQKY IRFTPEDLER MLNDFFQGKN 540
  541 LDVSPKR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 111.0
Match: 2pftA
Description: No description for 2pftA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle