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View Structure Prediction Details

Protein: VA0E1_ARATH
Organism: Arabidopsis thaliana
Length: 70 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VA0E1_ARATH.

Description E-value Query
Range
Subject
Range
gi|58384490, gi|... - gi|58384490|ref|XP_313344.2| ENSANGP00000011861 [Anopheles gambiae str. PEST], gi|55241061|gb|EAA088...
90.0 [0..3] [69..49]

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Predicted Domain #1
Region A:
Residues: [1-70]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFLITTLIF VVVGIIASLC VRICCNRGPS TNLLHLTLVI TATVCCWMMW AIVYIAQMNP  60
   61 LIVPILSETE 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 35.853872
Match: PF05493.4
Description: No description for PF05493.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle