| Protein: | gi|11908094, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 328 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11908094, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
472.0 | [0..80] | [328..89] |
|
Region A: Residues: [1-70] |
1 11 21 31 41 51
| | | | | |
1 MASSAASPSL SLLSFTSKPP YPSGSQRLFA SFRTDGLFAP LTLKSRRGRG IVVKVDDVDA 60
61 DGGGADEYDM
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.674 | b.3.5 | B repeat unit of collagen binding surface protein (cna) |
| View | Download | 0.650 | d.374.1 | Description not found. |
| View | Download | 0.618 | d.68.3 | SirA-like |
| View | Download | 0.618 | d.68.3 | SirA-like |
| View | Download | 0.597 | d.58.17 | Metal-binding domain |
| View | Download | 0.593 | b.3.2 | Carboxypeptidase D, a regulatory domain |
| View | Download | 0.578 | b.107.1 | Urease metallochaperone UreE, N-terminal domain |
| View | Download | 0.546 | d.93.1 | SH2 domain |
| View | Download | 0.524 | d.58.42 | N-utilization substance G protein NusG, N-terminal domain |
| View | Download | 0.510 | d.95.2 | Homing endonucleases |
|
Region A: Residues: [71-149] |
1 11 21 31 41 51
| | | | | |
1 DDEEVEEVDN KKDYDVEYDP LAAAIAAAGG GGDGDIAFVQ SKSFISTQGW DSDMVVDYRI 60
61 NEDEFHKLSL MDCDFFIRK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.857 | N/A | N/A | d.17.1 | Cystatin/monellin |
| View | Download | 0.802 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.765 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.759 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.753 | N/A | N/A | d.58.17 | Metal-binding domain |
| View | Download | 0.732 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.725 | N/A | N/A | d.58.17 | Metal-binding domain |
| View | Download | 0.702 | N/A | N/A | b.114.1 | N-utilization substance G protein NusG, insert domain |
| View | Download | 0.672 | N/A | N/A | b.1.1 | Immunoglobulin |
|
Region A: Residues: [150-328] |
1 11 21 31 41 51
| | | | | |
1 PPDPDNDVYD FREMYVTPPD TDIYSIPRVL APMPQKYIRC AMSDYGCYNV TEPPIDAPRD 60
61 PLYKSEREIS KVFLTKHYRN RRTNDPEFVL DLEEIYVIDS KTKSITRARV LVTVPGGRKR 120
121 DRKDDLLVIR DNGTSFKIIH VGERDDPTTV IEREEWTKTR EDMEKHLRKL RDFSVSNWF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
