YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: PFKA4_ARATH
Organism: Arabidopsis thaliana
Length: 530 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PFKA4_ARATH.

Description E-value Query
Range
Subject
Range
gi|79331832 - gi|79331832|ref|NP_001032120.1| PFK4 (PHOSPHOFRUCTOKINASE 4); 6-phosphofructokinase [Arabidopsis tha...
475.0 [0..1] [530..1]
gi|48257221 - gi|48257221|gb|AAH18295.2| PFKL protein [Homo sapiens]
453.0 [0..1] [524..31]
PFKAL_MOUSE - ATP-dependent 6-phosphofructokinase, liver type OS=Mus musculus GN=Pfkl PE=1 SV=4
449.0 [0..1] [494..243]
gi|114684640 - gi|114684640|ref|XP_001150308.1| PREDICTED: liver phosphofructokinase isoform 6 [Pan troglodytes]
449.0 [0..1] [524..266]

Back

Predicted Domain #1
Region A:
Residues: [1-82]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEASISFLGS TKPNISLFNP SSNVLPRRDF PLPALKLKKV SVLPRILHQK RLIRAQCSDG  60
   61 FKPEEDDGFV LEDVPHLTKF LP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [83-530]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLPSYPNPLK ESQAYAIVKR TFVSSEDVVA QNIVVQKGSK RGVHFRRAGP RERVYFRSDE  60
   61 VKACIVTCGG LCPGINTVIR EIVCGLNNMY GVNNILGIQG GYRGFYSKNT MNLTPKVVND 120
  121 IHKRGGTFLQ TSRGGHDTAK IVDNIQDRGI NQVYIIGGGG TQKGAEKIYE EVERRGLQVA 180
  181 VSGIPKTIDN DIAVIDKSFG FDTAVEEAQR AINAAHVEVE SVENGVGIVK LMGRYSGFIA 240
  241 MIATLANRDV DCCLIPESPF FLEGKGGLFE FIEERLKENR HMVIVIAEGA GQDYVAQSMR 300
  301 ASETKDASGN RLLLDVGLWL TQQIKDHFTN VRKMMINMKY IDPTYMIRAI PSNASDNVYC 360
  361 TLLAQSAVHG AMAGYSGFTV GPVNSRHAYI PISQVTEVTN TVKLTDRMWA RLLASTNQPS 420
  421 FLTGEGALQN VIDMETQEKI DNMKISSI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 88.0
Match: 2higA
Description: No description for 2higA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle