| Protein: | gi|7270606, gi|4... |
| Organism: | Arabidopsis thaliana |
| Length: | 620 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7270606, gi|4....
| Description | E-value | Query Range |
Subject Range |
|
|
311.0 | [0..70] | [616..179] |
|
Region A: Residues: [1-117] |
1 11 21 31 41 51
| | | | | |
1 MAASRLCSAA AIAAAFTSMS MSQNRAYADS SRFRFPFFSS SPSPPPSDSP ANQSSSKSKA 60
61 EPDEPKGSGF DPEALERAAK ALRDINSSPH SKQVFDLMRK QEKTRLAELT AETSHYE
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [118-620] |
1 11 21 31 41 51
| | | | | |
1 AIQAHNDIGR QQKLAEDQRN LLQTQAQTKA QNLRYEDELA RKRQQTDHEA QRHHNVELVK 60
61 MQEASSIRKE KAKIATEEQI QAQHRQTEKE RAELERETIR VKAMAEAEGR AHEAKLTEEQ 120
121 NRRLLMERIN GEREKWLAAI NTMFSHIEGG FRTLLTDRNK LIMTVGGATA LAAGVYTTRM 180
181 LGQPSLIRES SMRRFPWTGS VSQFKNRISG AAAASAAEGK KPLDNVILHT SLKKRIERLA 240
241 RATANTKSHQ APFRNMMFYG PPGTGKTMVA REIARKSGLD YAMMTGGDVA PLGSQAVTKI 300
301 HQIFDWAKKS NKGLLLFIDE ADAFLCERNS TYMSEAQRSA LNALLFRTGD QSRDIVLVLA 360
361 TNRRGDLDSA VTDRIDEVIE FPLPGEEERF KLLNLYLNKY LKMGDNNEDT KPKWSHLFKK 420
421 LSQKITVEED LTDKVISEAA KKTEGFSGRE IAKLVAGVQA GVYGRADCVL DSQLFKEIVE 480
481 YKVEEHHRRH MLASEGFQPL LFS
|
| Detection Method: | |
| Confidence: | 76.221849 |
| Match: | 1oz4A |
| Description: | VCP/p97 |
Matching Structure (courtesy of the PDB): |
|
