YRC Public Data Repository - Protein Structure Prediction

Protein:	HATB_ARATH
Organism:	Arabidopsis thaliana
Length:	467 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HATB_ARATH.

Description	E-value	Query Range	Subject Range
gi\|45383710, gi\|... - gi\|9963998\|gb\|AAG09795.1\|AF257739_1 histone acetyltransferase-1 [Gallus gallus], gi\|45383710\|ref\|NP_...	486.0	[0..21]	[457..7]
gi\|112362414 - gi\|112362414\|gb\|AAI20388.1\| HAT1 protein [Bos taurus]	486.0	[0..21]	[457..18]
gi\|74004586 - gi\|74004586\|ref\|XP_850080.1\| PREDICTED: similar to Histone acetyltransferase type B catalytic subuni...	484.0	[0..21]	[457..18]
gi\|55613955 - gi\|55613955\|ref\|XP_515904.1\| PREDICTED: similar to histone acetyltransferase 1 isoform 4 [Pan troglo... HAT1 - histone acetyltransferase 1	481.0	[0..21]	[457..18]
HAT1_RAT - Histone acetyltransferase type B catalytic subunit OS=Rattus norvegicus GN=Hat1 PE=2 SV=1	478.0	[0..21]	[457..18]
gi\|71297073 - gi\|71297073\|gb\|AAH45673.1\| HAT1 protein [Homo sapiens] gi\|114581757, gi... - gi\|114581759\|ref\|XP_001146383.1\| PREDICTED: similar to histone acetyltransferase 1 isoform 3 [Pan tr...	477.0	[0..21]	[457..12]
gi\|147906079, gi... - gi\|51950016\|gb\|AAH82402.1\| MGC81978 protein [Xenopus laevis], gi\|147906079\|ref\|NP_001087873.1\| MGC81...	477.0	[0..21]	[457..1]
gi\|51858542, gi\|... - gi\|52218998\|ref\|NP_001004572.1\| histone acetyltransferase 1 [Danio rerio], gi\|51858542\|gb\|AAH81671.1...	472.0	[0..21]	[456..7]
HAT1_MOUSE - Histone acetyltransferase type B catalytic subunit OS=Mus musculus GN=Hat1 PE=1 SV=1	469.0	[0..21]	[457..15]

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Predicted Domain #1

Region A:
Residues: [1-366]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQKQQASAG PGTEPKKRRR VGFSPADTGV EANECIKIYL VSSKEEVDSS DISSVKPVDL  60
   61 NDFFDGDGKI YGYQGLKINV WINSISLHSY ADITYQSTIN GDKGITDLKS ALQNIFAETI 120
  121 VDTKDEFLQT FSTQRDFIRN MVSNGEVMHA GATDGSSKNA EVVPSDPQVI RMEIGSPNAG 180
  181 LLYSRLVPLV LLFVDGSNPI DVTDPDWHLY LLIQKKEEKE DPLYRIVGFT AIYKFYRYPD 240
  241 RLRMRLSQIL VLPSFQGKGL GSYLMEVVNN VAITENVYDL TVEEPSEKFQ HIRTCIDINR 300
  301 LRSFDPIKPD IDSAVQTLTK GKLSKKAQIP RFTPPLNAIE KVRESLKINK KQFLKCWEIL 360
  361 IYLALD

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	118.0
Match:	2p0wA
Description:	No description for 2p0wA was found.

Predicted Domain #2

Region A:
Residues: [367-467]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PIDKYMEDYT SVITNHVRTD ILGKDIETPK KQVVDVPSSF EPEASFVVFK SVNGEEANTN  60
   61 VQVDENKPDQ EQQLKQLVEE RIREIKLVAE KVSKSGQTLK V

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits