YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|15217675, gi\|...
Organism:	Arabidopsis thaliana
Length:	225 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15217675, gi|....

Description	E-value	Query Range	Subject Range
DER_SYNY3, ENGA_... - GTP-binding protein engA OS=Synechocystis sp. (strain PCC 6803) GN=engA PE=3 SV=1, GTPase Der OS=Syn... DER_SYNY3 - GTPase Der OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=der PE=3 SV=1 gi\|7450580 - pir\|\|S75645 probable GTP binding protein slr1974 - Synechocystis sp. (strain PCC 6803)	147.0	[0..3]	[220..171]

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Predicted Domain #1

Region A:
Residues: [1-225]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEQECPVTN LLLLGRSENG KSSTGNTIIG EKYFEVNLFG RDMDQRCKMF RALIEDGPII  60
   61 NVIDTPGLLE SSVSGDYLSK EIMNCLTMAE EGIHAVLFVL SITNRISQRE EFTFNTLQQI 120
  121 FDDKILDYFI VVFTGGDELE ADNQTLDDYL REGCPEFLTR VLKLCGGRKV LFNNKTKDKG 180
  181 KRNKQLNQLL AHVTDIRQQN GGIPYTENMH RKIKFKNLKY SNVKL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	27.69897
Match:	2hjgA
Description:	No description for 2hjgA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits