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View Structure Prediction Details

Protein: FOX1_ARATH
Organism: Arabidopsis thaliana
Length: 535 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FOX1_ARATH.

Description E-value Query
Range
Subject
Range
FOX5_ARATH - Flavin-dependent oxidoreductase FOX5 OS=Arabidopsis thaliana GN=FOX5 PE=3 SV=1
366.0 [0..1] [525..1]

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Predicted Domain #1
Region A:
Residues: [1-535]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEALFGLYL VLLVSGLEAA VTKPNSGNFI ECLRYQASPE NPITDAIFTV DNTTTFLSSY  60
   61 VSYTKNTRFS NPNNKNLLAI VVAKDVSHVQ ATVVCAKSNG IQIRIRSGGH DNEGLSYVSS 120
  121 VPFVILDMHK LRDITVDVSS KKAWVQAGAT LGELYVKIDE ASQTLAFPAG ICATVGAGGH 180
  181 ISGGGYGNLM RKFGTTVDHV IDAELVDVNG KLLNRSTMGE DLFWAIRGGG GASFGVILSW 240
  241 KINLVEVPKI FTVFQVNKTL EQGGTDVVYK WQLVANKFPD NLFLRAMPQV VNGTKHGERT 300
  301 IAIVFWAQFL GRTDELMEIM NQSFPELGLR REDCQEMSWL NTTLFWAMLP AGTPKTVLLG 360
  361 RPTDPVFFKS KSDYVKKPIP KEGLEKIWKT MLKFNNIVWL HFNPYGGMMD RIPSNATAFP 420
  421 HRKGNLFKVQ YYTTWLDPNA TESNLSIMKE LYEVAEPYVS SNPREAFFNY RDIDIGSNPS 480
  481 GETDVDEAKI YGYKYFLGNL KRLMDVKAKS DPENFFKNEQ SIPPLLSRVR RDDEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.0
Match: 2bvfA
Description: Crystal structure of 6-hydoxy-D-nicotine oxidase from Arthrobacter nicotinovorans. Crystal Form 3 (P21)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle