| Protein: | gi|11994443, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 922 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11994443, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
658.0 | [0..84] | [912..390] |
|
Region A: Residues: [1-144] |
1 11 21 31 41 51
| | | | | |
1 MDPEAKLILL ILRFNALKSY INSDPEEVMS VISQIISLVK SMVTETETEL MSLISETIDF 60
61 FKEMDLESQP NSLRKLISLI SRTHFVNSSD WEEPVPESTL MSLIKETWSM KPQPELISLI 120
121 QKIISLVDNS PELKLKSFIT QLIF
|
| Detection Method: |  |
| Confidence: | 4.39794 |
| Match: | 1v65A |
| Description: | Solution structure of the Kruppel-associated box (KRAB) domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [145-303] |
1 11 21 31 41 51
| | | | | |
1 LDDNLSERLN WNYSRRFLSL SRYIISLATS VDWNLQPKPE SELMSLTNQS ISVFNSMDVD 60
61 SQPEPLRNLI SLISLASFRS SPTNLRYSKP NMVDILNLFK DKTVEFETGS LTKRVVWKSL 120
121 NKKLFLLVTE TLSLDPEPKL ISLIHRIFSH VLSMNSKWK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [304-475] |
1 11 21 31 41 51
| | | | | |
1 NLISLCPQVQ VILKKGKFHV IEQGLWTRNQ KWDDPVSDDD STEARVVSWR KNKWDCLPFN 60
61 WDKFMLTEEK DDTHFVCRGC YGENHEDNSK APVEIKHPLH PKHSLQLALF NDDKTRQCYC 120
121 CHELLRDDTA SMFYFCSPCD FGLKFTCAKK SPVLSIDQPK WHEHTLALFP SQ
|
| Detection Method: | |
| Confidence: | 1.06 |
| Match: | 2jm1A |
| Description: | No description for 2jm1A was found. |
|
Region A: Residues: [476-660] |
1 11 21 31 41 51
| | | | | |
1 DPQTCSLCAL KHSNLVFYIC PPCDFIIHQS CFSLPHVIRI SRHLHCISFT HSFRKGDWIC 60
61 GVCRRKINND YGGYHCIKKG CLYAVHSKCA TQPNVWDGIE REGESEEEVE ELEPFLTISD 120
121 GIIQHFSHEH HHLTLDENNG KDYDENKLCQ ACIMPIYFGN SYSCLQCDFI LHEECANLSR 180
181 RLHHP
|
| Detection Method: | |
| Confidence: | 13.522879 |
| Match: | 1tf6A |
| Description: | Transcription factor IIIA, TFIIIA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.414217765611205 | bayes_pls_golite062009 |
|
Region A: Residues: [661-750] |
1 11 21 31 41 51
| | | | | |
1 IHPHLLTLIS DNPLRDVGSW NNSDRDYCSA CPSLCISGFF YKCSKIDCDF RLHVQCATIS 60
61 EPLLHPSHMH HLFLTSKPNE ERNCSVCAKA
|
| Detection Method: | |
| Confidence: | 47.0 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [751-922] |
1 11 21 31 41 51
| | | | | |
1 PGEYTKETFN CIEEECDYAL CFKCATLPQQ VRYKHDKHIL PLSYGKKTSD MTYWCEACEG 60
61 KINPEEGFYR CDEYCCVHLH ITCLLGKDLY LKPRSSWSLS CGALLILPNY LWMSRPICSS 120
121 CGNRCPQRIF LFLLSGASFF CSVYCIPTTR ELGFFPGLEA GELALILSSF RS
|
| Detection Method: | |
| Confidence: | 1.97 |
| Match: | 1v5nA |
| Description: | Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0196698141692984 | bayes_pls_golite062009 |
