| Protein: | PDV1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 272 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PDV1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
467.0 | [0..4] | [272..1] |
|
|
366.0 | [0..4] | [272..1] |
|
Region A: Residues: [1-74] |
1 11 21 31 41 51
| | | | | |
1 MGEMEIEEIE AVLEKIWDLH DKLSDEIHLI SKSHFLKSVK PSNRSEKRKN PHGNSGEDKR 60
61 PGYVFIKGFA VDDN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [75-163] |
1 11 21 31 41 51
| | | | | |
1 DSTIQEAKSL NAIRTALENL EDQLEFFHTI HTQQRTEKDV AIARLEQSRI LLAMRLAEHH 60
61 GKNYGVLEEA LAFVGSIKSN SHYVSPDHL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.995 | N/A | N/A | a.47.2 | t-snare proteins |
|
Region A: Residues: [164-272] |
1 11 21 31 41 51
| | | | | |
1 YDSSRNPDGA NSIPDGIESN FVINAFASTF GFAKRALGFN HVKGVLGNAA IFAISVVAML 60
61 HLHQVATSEH HLQKKEDRFY RSQQRKTYGR DKSSADRSLD HLDVMMARG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
