| Protein: | gi|15225452, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 384 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15225452, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
460.0 | [0..1] | [384..1] |
|
Region A: Residues: [1-77] |
1 11 21 31 41 51
| | | | | |
1 MIKNDGKMMR VRIAKERSDL CDLTAAAIKA TYNTRNPCEV ERCIDVLNHL KSLSLSVKDI 60
61 RLSESIVKLE TLRSHRN
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.819 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
|
Region A: Residues: [78-256] |
1 11 21 31 41 51
| | | | | |
1 PRIRKEAQAL FHSWLKTFYA HGSDNSFTAA LTKDRLKMKK HVLKMCSELK KKEEPGTMAR 60
61 QVTAFSVLKN KEDERSQTTV EAVESKTTIK LSELNRKEDQ RSLTRETEKN KARNSFLALK 120
121 QKEDHRSETC VEKYFKKETK TNLKQLNMKT RRVSLEDVTT KKPHEDGSLI KKTKTEKEL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [257-384] |
1 11 21 31 41 51
| | | | | |
1 KKKKVDEMVK LFEAAKKAAD VANAKGVLSG KPEVSRCIDA LSLLMKINIT PKPKEPRRMM 60
61 DKLEGLTKHK DRKICHVASA LLHLWRQRIR EQERKKSVTK ASSKTRKLSY VKIIWLEQIK 120
121 VSCGFKRF
|
| Detection Method: | |
| Confidence: | 2.38 |
| Match: | 1pqvS |
| Description: | RNA polymerase II-TFIIS complex |
Matching Structure (courtesy of the PDB): |
|
