| Protein: | RFS2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 773 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RFS2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
1005.0 | [0..1] | [773..1] |
|
|
976.0 | [0..1] | [773..1] |
|
|
965.0 | [0..1] | [773..1] |
|
|
949.0 | [0..1] | [773..1] |
|
|
935.0 | [0..1] | [773..1] |
|
|
931.0 | [0..1] | [773..1] |
|
|
929.0 | [0..1] | [773..1] |
|
|
900.0 | [0..1] | [772..1] |
|
|
891.0 | [0..1] | [773..1] |
|
Region A: Residues: [1-571] |
1 11 21 31 41 51
| | | | | |
1 MTITSNISVQ NDNLVVQGKT ILTKIPDNII LTPVTGNGFV SGSFIGATFE QSKSLHVFPI 60
61 GVLEGLRFMC CFRFKLWWMT QRMGSCGKDI PLETQFMLLE SKDEVEGNGD DAPTVYTVFL 120
121 PLLEGQFRAV LQGNEKNEIE ICFESGDKAV ETSQGTHLVY VHAGTNPFEV IRQSVKAVER 180
181 HMQTFHHREK KKLPSFLDWF GWCTWDAFYT DVTAEGVDEG LKSLSEGGTP PKFLIIDDGW 240
241 QQIENKEKDE NCVVQEGAQF ATRLVGIKEN AKFQKSDQKD TQVSGLKSVV DNAKQRHNVK 300
301 QVYAWHALAG YWGGVKPAAS GMEHYDSALA YPVQSPGVLG NQPDIVMDSL AVHGLGLVNP 360
361 KKVFNFYNEL HSYLASCGID GVKVDVQNII ETLGAGLGGR VSLTRSYQQA LEASIARNFT 420
421 DNGCISCMCH NTDGLYSAKQ TAIVRASDDF YPRDPASHTI HIASVAYNSL FLGEFMQPDW 480
481 DMFHSLHPTA EYHAAARAVG GCAIYVSDKP GNHNFDLLRK LVLPDGSVLR AKLPGRPTRD 540
541 CLFADPARDG ISLLKIWNMN KFTGIVGVFN C
|
| Detection Method: |  |
| Confidence: | 48.39794 |
| Match: | 1zy9A |
| Description: | Crystal structure of Alpha-galactosidase (EC 3.2.1.22) (Melibiase) (tm1192) from Thermotoga maritima at 2.34 A resolution |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [572-631] |
1 11 21 31 41 51
| | | | | |
1 QGAGWCKETK KNQIHDTSPG TLTGSIRADD ADLISQVAGE DWSGDSIVYA YRSGEVVRLP 60
61
|
| Detection Method: | |
| Confidence: | 78.39794 |
| Match: | 1uasA |
| Description: | Melibiase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [632-773] |
1 11 21 31 41 51
| | | | | |
1 KGASIPLTLK VLEYELFHIS PLKEITENIS FAPIGLVDMF NSSGAIESID INHVTDKNPE 60
61 FFDGEISSAS PALSDNRSPT ALVSVSVRGC GRFGAYSSQR PLKCAVESTE TDFTYDAEVG 120
121 LVTLNLPVTR EEMFRWHVEI LV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.360 | N/A | N/A | b.60.1 | Lipocalins |
| View | Download | 0.359 | N/A | N/A | b.76.1 | Outer surface protein A |
| View | Download | 0.358 | N/A | N/A | b.60.1 | Lipocalins |
| View | Download | 0.334 | N/A | N/A | b.60.1 | Lipocalins |
| View | Download | 0.289 | N/A | N/A | b.60.1 | Lipocalins |
| View | Download | 0.276 | N/A | N/A | b.60.1 | Lipocalins |
