| Protein: | gi|15226245, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 368 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15226245, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
452.0 | [0..1] | [368..2] |
|
Region A: Residues: [1-127] |
1 11 21 31 41 51
| | | | | |
1 MKNEEKMRVR IAKERSDLCD LTAAAIKATY NTRNPCEVER CIDVLNHLKS LSLSVKDIRL 60
61 SESIVKLETL RSHRNPRIRK AAQALFHSWL KTFYAHGSDN SFKAALTKDR LKMEKHVLTR 120
121 CSELKKE
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.809 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.745 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.690 | N/A | N/A | d.58.57 | Description not found. |
| View | Download | 0.684 | N/A | N/A | a.79.1 | Antitermination factor NusB |
| View | Download | 0.684 | N/A | N/A | a.79.1 | Antitermination factor NusB |
| View | Download | 0.678 | N/A | N/A | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.662 | N/A | N/A | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.626 | N/A | N/A | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.621 | N/A | N/A | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.582 | N/A | N/A | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.488 | N/A | N/A | d.58.16 | Poly(A) polymerase, C-terminal domain |
| View | Download | 0.474 | N/A | N/A | d.110.4 | SNARE-like |
| View | Download | 0.459 | N/A | N/A | d.198.2 | Arp2/3 complex subunits |
| View | Download | 0.446 | N/A | N/A | d.58.16 | Poly(A) polymerase, C-terminal domain |
| View | Download | 0.383 | N/A | N/A | d.52.8 | Description not found. |
|
Region A: Residues: [128-254] |
1 11 21 31 41 51
| | | | | |
1 DEPGTMACQV TAFTVLKNKE DERTLTTVEA VESKTTIKLS ELNKKEDQRS LTRETEKIKA 60
61 RNSFLALKQK EDHKSETCDE KYFKKETKTN LKPLNMKTRR VSLVDVTTKK PHEDGSLIKK 120
121 TKTEKEL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.578 | a.216.1 | Description not found. |
| View | Download | 0.566 | a.25.1 | Ferritin-like |
| View | Download | 0.566 | a.25.1 | Ferritin-like |
| View | Download | 0.517 | a.25.1 | Ferritin-like |
| View | Download | 0.491 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.491 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.479 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.479 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.455 | a.19.1 | Fertilization protein |
| View | Download | 0.334 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.235 | d.198.1 | Type III secretory system chaperone |
| View | Download | 0.226 | c.55.4 | Translational machinery components |
| View | Download | 0.208 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.201 | c.47.1 | Thioredoxin-like |
|
Region A: Residues: [255-368] |
1 11 21 31 41 51
| | | | | |
1 KKKKVDEMVK LFEAAKKAAD VANAKGVLSG KAEASRCIDA LSVLMKINIT PKPKEPRRMM 60
61 DKLEGLTKHK DRMICHVASA LLHLWRQRIR EQERKKSVTK ASSKNIQRRG NLVM
|
| Detection Method: | |
| Confidence: | 1.32 |
| Match: | 1wjtA |
| Description: | Solution structure of the N-terminal Domain I of mouse transcription elongation factor S-II protein 3 |
Matching Structure (courtesy of the PDB): |
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