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View Structure Prediction Details

Protein: gi|8885583, gi|1...
Organism: Arabidopsis thaliana
Length: 292 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|8885583, gi|1....

Description E-value Query
Range
Subject
Range
gi|15795118, gi|... - gi|7021738|gb|AAF35419.1| unknown protein [Arabidopsis thaliana], gi|30683646|ref|NP_850590.1| methy...
170.0 [0..1] [291..1]

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Predicted Domain #1
Region A:
Residues: [1-292]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKTTNGTRD WAQIYAIYGI EQKHTLIFLI LNAIAFSILS TVFVIYFNPI CVFFQSFLFS  60
   61 NAAAARFSAG FFGAVTALSA VCLFFAAANF FYSAVPLRYE MAQRMVGSVG DWSSVKTALD 120
  121 LGCGRGILLN AVATQLKKTG SSGRVVGLDR SMTTTLSTLR TAHIEGVQEY VTCREGDVRR 180
  181 LPFSDNYFDV VVSAVFLHTI GKEYGQKTVE AAAERMRVLG EAVRVLKPGG VGVVWDLVHV 240
  241 PEYVRRLQEL RMEEIRVSKR VTAFMVKSHM VSFKKPSQHF VGSGEVRLDW RC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.69897
Match: 1sqfA
Description: The crystal structure of E. coli Fmu binary complex with S-Adenosylmethionine at 2.1 A resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.723277178398499 bayes_pls_golite062009
transferase activity 0.64512166557639 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.54403439349476 bayes_pls_golite062009
methyltransferase activity 0.54389223881989 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle