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View Structure Prediction Details

Protein: VDAC5_ARATH
Organism: Arabidopsis thaliana
Length: 226 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VDAC5_ARATH.

Description E-value Query
Range
Subject
Range
gi|5031279 - gi|5031279|gb|AAD38145.1|AF139498_1 porin [Prunus armeniaca]
268.0 [0..1] [226..1]

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Predicted Domain #1
Region A:
Residues: [1-74]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKGPGLFAD IGKYAKDLLT RDYSTDQKFS ISTNSVSGVA LTSTALKNGV LHAANVATQY  60
   61 KYRNTFFDVK IDTD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [75-226]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FNVKSLVYPM NKFVSIDHNT LTGYDTTSRT FTKYNVGVSV TKPDQCVSII LGDKGDSIKA  60
   61 SYVYYLDEST RSATVGEVIR KISTNETTVT VGGLYAVDHL TNVKAKLNSN GKFGALLQHE 120
  121 GLPKSIVTIS GEIDTKTLDK YPRLGLSLSL KP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle