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View Structure Prediction Details

Protein: gi|79317210, gi|...
Organism: Arabidopsis thaliana
Length: 279 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|79317210, gi|....

Description E-value Query
Range
Subject
Range
gi|114652167 - gi|114652167|ref|XP_509857.2| PREDICTED: neuroguidin isoform 6 [Pan troglodytes]
191.0 [0..10] [277..4]
NGDN_BOVIN - Neuroguidin OS=Bos taurus GN=NGDN PE=2 SV=1
184.0 [0..11] [277..5]
gi|109082972 - gi|109082972|ref|XP_001108133.1| PREDICTED: similar to Protein C14orf120 isoform 1 [Macaca mulatta]
183.0 [0..11] [277..5]
gi|73962635 - gi|73962635|ref|XP_547734.2| PREDICTED: similar to Protein C14orf120 [Canis familiaris]
182.0 [0..4] [277..1]
gi|190690461, gi... - gi|190691837|gb|ACE87693.1| neuroguidin, EIF4E binding protein protein [synthetic construct], gi|190...
NGDN - neuroguidin, EIF4E binding protein
180.0 [0..10] [277..4]
gi|23272205 - gi|23272205|gb|AAH23770.1| Ngdn protein [Mus musculus]
180.0 [0..5] [277..1]

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Predicted Domain #1
Region A:
Residues: [1-108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEITKPVLV GIVKKEAPQL ASVLREMKNV LDVVRSKVEA LTALVKANSF PTAGGISYLE  60
   61 AKHLLLLSYC QDLVYYILRK AKGLSIDGHP LVRSLVEIRM FLEKIRPI

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 26.79588
Match: PF04000.7
Description: No description for PF04000.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [109-279]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DKKLQYQIQK LTTAGGPVTE LAHSEGKGSC EAQKSEDLSN YKPKPDLLAD KEDDQEDDGV  60
   61 YRPPKFAPMS MEDKTSKQER DAARKEKHFF RQATENTYMK DVLDDLEDRP EEIRDYYGVE 120
  121 SNEQKRFMAQ YERQQKAEEE LFTRAPRTKE DKKREKRLKS SSGYVFALVG N

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle