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View Structure Prediction Details

Protein: P2A01_ARATH
Organism: Arabidopsis thaliana
Length: 246 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P2A01_ARATH.

Description E-value Query
Range
Subject
Range
gi|21553855 - gi|21553855|gb|AAM62948.1| lectin-like protein [Arabidopsis thaliana]
339.0 [0..14] [246..1]

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Predicted Domain #1
Region A:
Residues: [1-79]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKHCSELL PNKMFRNQDS KYLIPVQKEA PPVTTLPMKA STVKSPHNCE AILRDADPPI  60
   61 SLSSVNLSEQ LRSGVFLKP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [80-246]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKQIKYWVDE RNSNCFMLFA KNLSITWSDD VNYWTWFTEK ESPNENVEAV GLKNVCWLDI  60
   61 TGKFDTRNLT PGIVYEVVFK VKLEDPAYGW DTPVNLKLVL PNGKEKPQEK KVSLRELPRY 120
  121 KWVDVRVGEF VPEKSAAGEI TFSMYEHAAG VWKKGLSLKG VAIRPKQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.973 N/A N/A b.1.10 Clathrin adaptor appendage domain


YRC Informatics Platform - Version 3.0
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