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View Structure Prediction Details

Protein: gi|21536837, gi|...
Organism: Arabidopsis thaliana
Length: 145 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21536837, gi|....

Description E-value Query
Range
Subject
Range
gi|94419740, gi|... - gi|94419740|ref|XP_001001548.1| PREDICTED: similar to X-linked eukaryotic translation initiation fac...
172.0 [0..1] [145..1]

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Predicted Domain #1
Region A:
Residues: [1-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKNKGKGGK NRKRGKNEAD DEKRELIFKE DGQEYAQVLR MLGNGRCDVM CIDGVKRLCH  60
   61 IRGKMHKKVW IAAGDIILVG LRDYQDDKAD VILKYMSDEA RLLKAYGELP ENTRLNEGIV 120
  121 GDLDDDDDVV GEDYIEFEDE DIDRI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.522879
Match: 1d7qA
Description: Translation initiation factor-1a, eIF1a
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.141433535514844 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle