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View Structure Prediction Details

Protein: P24B2_ARATH
Organism: Arabidopsis thaliana
Length: 208 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P24B2_ARATH.

Description E-value Query
Range
Subject
Range
gi|109066641, gi... - gi|109066643|ref|XP_001091631.1| PREDICTED: similar to transmembrane emp24 protein transport domain ...
228.0 [0..4] [205..14]

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Predicted Domain #1
Region A:
Residues: [1-120]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLKGTIVLL GLLWSFQATL GIRFVIDREE CFSHKAEYEG DTLHVSFVVI KSDSQWHFNE  60
   61 DGVDLVIHGP TGEQIHDFRE QISAKHDFVV QKKGVYRFCF TNKSPYHETI DFDVQLGHFA 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 12.744727
Match: PF01105.15
Description: No description for PF01105.15 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [121-208]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YYDQHAKDEH FTPLMEQISK LEEALYNIQF EQHWLEAQTD RQAIVNENMS KRAVHKALFE  60
   61 SFALIGASFL QVYLLRRLFE RKLGMSRV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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