| Protein: | MAD1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 726 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MAD1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
342.0 | [0..5] | [721..2036] |
|
Region A: Residues: [1-227] |
1 11 21 31 41 51
| | | | | |
1 MILRTPQPKR LRSDAGESPF PTGATGSGNQ LIIYEDSPLP APAPLQTSHD HSADQHLCTY 60
61 QCRQMVKADV LDALSTAEKQ VEESKTKLQT LNANFTEADA ERKHFRDKFL YSEQELAAAK 120
121 AREKMLQEQL LMEINNSQER YTKELQSCHE LEVKLQNEMN LRKKAESSAA TAEEKAKLLE 180
181 DKLTQLSGSV DREKKRLNND IAQLGKEAKL SVARIGADLE RMQCRAQ
|
| Detection Method: |  |
| Confidence: | 2.02 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
|
Region A: Residues: [228-545] |
1 11 21 31 41 51
| | | | | |
1 NAETESNLLR SQLEHLKLIF DECLQEKTEV DKKLSSFTSE AASSSDNSVL VKHLQEELKR 60
61 YEAEVREARK LKSRHLDAEL LNVNLLEEQS RRERAESELS KFHDLQLSME KLENELSSWK 120
121 SLLNDIPGVS CPDDIVMRFS VLQNEVVQST MKIGEASTRI KQLEETLEAI QLGRQNAVSE 180
181 AALAKEKSEA LKTDVKRIEV MLTLVTEEKE QLKAVVNELR KSNSEGSVSG AADGALIQGF 240
241 ESSLAKKENY IKDLEQDLNQ LKDVNNRQRT EIELLNEKLV DEARRNKSLE RDSDRLRSEI 300
301 SLLESKLGHG DYSAANTR
|
| Detection Method: | |
| Confidence: | 19.221849 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [546-653] |
1 11 21 31 41 51
| | | | | |
1 VLRMVNTLGV ENEAKQTIEA LQAELQKTKE RLQAVEELKS QSGDAGKLVD SHITGKIAQL 60
61 KEQNATLEKR EERYKTVFAD RISVFRRACC ELFGYKIVMD EHQRPNGI
|
| Detection Method: | |
| Confidence: | 11.154902 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [654-726] |
1 11 21 31 41 51
| | | | | |
1 PVTRFTLQSI YAQSDDEKLE FEYESGNTSI LNNEYASQGD IAKQIEIFIR KFNSIPAFTA 60
61 NLTMESFNRR TLY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
