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View Structure Prediction Details

Protein: ENDO2_ARATH
Organism: Arabidopsis thaliana
Length: 290 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ENDO2_ARATH.

Description E-value Query
Range
Subject
Range
gi|21554516 - gi|21554516|gb|AAM63596.1| putative bifunctional nuclease [Arabidopsis thaliana]
433.0 [0..1] [290..1]

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Predicted Domain #1
Region A:
Residues: [1-290]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANQKGLHVV MMIITVWLLY AAPNIHGWGK EGHEIICKIA QTRLDETAAK AVKELLPESA  60
   61 EGDLSSLCLW ADRVKFRYHW SSPLHYINTP DACSYQYNRD CKDESGEKGR CVAGAIYNYT 120
  121 TQLLSYKTAA SSQSQYNLTE ALLFVSHFMG DIHQPLHVSY ASDKGGNTIE VHWYTRKANL 180
  181 HHIWDSNIIE TAEADLYNSA LEGMVDALKK NITTEWADQV KRWETCTKKT ACPDIYASEG 240
  241 IQAACDWAYK GVTEGDTLED EYFYSRLPIV YQRLAQGGVR LAATLNRIFG 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.045757
Match: 1ak0A
Description: P1 NUCLEASE IN COMPLEX WITH A SUBSTRATE ANALOG
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.237569247811196 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle