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View Structure Prediction Details

Protein: FAX3_ARATH
Organism: Arabidopsis thaliana
Length: 335 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FAX3_ARATH.

Description E-value Query
Range
Subject
Range
gi|21554522 - gi|21554522|gb|AAM63598.1| putative non-green plastid inner envelope membrane protein [Arabidopsis t...
479.0 [0..2] [335..1]

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Predicted Domain #1
Region A:
Residues: [1-204]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSIPMELMS IRNPNSTLLY RAHSRPPVKL CAPPRSLLPS RRHFSAPRAV VSYPGIRFGF  60
   61 TSPEVLLNRS VVAFAASHED SGESGVEVGK EKSDIDVEDD TSKEAWKQTL ESFKEQVSKM 120
  121 QSVSSEAYSV NSQKAMTVLK ETSEQLRIQA EKAKEELGTK AKVVSEEGRE YILKAAEESP 180
  181 SDVKEIVEAF ASTEDLKNVS RAND

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [205-335]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FHVGIPYGLL LLVGGFINFM VSGSIPAIRF GVILGGALFA LSLASLKSHR KGESSTKFLK  60
   61 GQMAIVAIIF LRELRLLLSQ KSTFLGFFTT LTSGGVLGFY LYKMVVKREK GPTLEDGGED 120
  121 ESSDGFVRSE G

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 3.045757
Match: PF03647.4
Description: No description for PF03647.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle