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View Structure Prediction Details

Protein: gi|20259169, gi|...
Organism: Arabidopsis thaliana
Length: 639 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20259169, gi|....

Description E-value Query
Range
Subject
Range
gi|11191231 - gi|11191231|emb|CAC16347.1| putative helicase [Arabidopsis thaliana]
458.0 [0..5] [639..1]

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Predicted Domain #1
Region A:
Residues: [1-639]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARKMSLEAF VSTMAPLIDM EKEAEISMSL TSGASRNIET AQKKGTTILN LKCVDVQTGL  60
   61 MGKSLIEFQS NKGDVLPAHK FGNHDVVVLK LNKSDLGSSP LAQGVVYRLK DSSITVVFDE 120
  121 VPEEGLNTSL RLEKLANEVT YRRMKDTLIQ LSKGVLRGPA SDLVPVLFGE RQPSVSKKDV 180
  181 KSFTPFNKNL DQSQKDAITK ALSSKDVFLL HGPPGTGKTT TVVEIVLQEV KRGSKILACA 240
  241 ASNIAVDNIV ERLVPHKVKL VRVGHPARLL PQVLDSALDA QVLKGDNSGL ANDIRKEMKA 300
  301 LNGKLLKAKD KNTRRLIQKE LRTLGKEERK RQQLAVSDVI KNADVILTTL TGALTRKLDN 360
  361 RTFDLVIIDE GAQALEVACW IALLKGSRCI LAGDHLQLPP TIQSAEAERK GLGRTLFERL 420
  421 ADLYGDEIKS MLTVQYRMHE LIMNWSSKEL YDNKITAHSS VASHMLFDLE NVTKSSSTEA 480
  481 TLLLVDTAGC DMEEKKDEEE STYNEGEAEV AMAHAKRLME SGVQPSDIGI ITPYAAQVML 540
  541 LRILRGKEEK LKDMEISTVD GFQGREKEAI IISMVRSNSK KEVGFLKDQR RMNVAVTRSR 600
  601 RQCCIVCDTE TVSSDAFLKR MIEYFEEHGE YLSASEYTN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 117.0
Match: 2gjkA
Description: No description for 2gjkA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle