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View Structure Prediction Details

Protein: ASIL1_ARATH
Organism: Arabidopsis thaliana
Length: 383 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ASIL1_ARATH.

Description E-value Query
Range
Subject
Range
ZSCAN20 - zinc finger and SCAN domain containing 20
161.0 [0..11] [321..166]

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Predicted Domain #1
Region A:
Residues: [1-189]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDDDEIQSI PSPGDSSLSP QAPPSPPILP TNDVTVAVVK KPQPGLSSQS PSMNALALVV  60
   61 HTPSVTGGGG SGNRNGRGGG GGSGGGGGGR DDCWSEEATK VLIEAWGDRF SEPGKGTLKQ 120
  121 QHWKEVAEIV NKSRQCKYPK TDIQCKNRID TVKKKYKQEK AKIASGDGPS KWVFFKKLES 180
  181 LIGGTTTFI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.09
Match: 1ug2A
Description: Solution Structure of Mouse Hypothetical Gene (2610100B20Rik) Product Homologous to Myb DNA-binding Domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.232528774113254 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [190-271]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASSKASEKAP MGGALGNSRS SMFKRQTKGN QIVQQQQEKR GSDSMRWHFR KRSASETESE  60
   61 SDPEPEASPE ESAESLPPLQ PI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [272-383]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QPLSFHMPKR LKVDKSGGGG SGVGDVARAI LGFTEAYEKA ETAKLKLMAE LEKERMKFAK  60
   61 EMELQRMQFL KTQLEITQNN QEEEERSRQR GERRIVDDDD DRNGKNNGNV SS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.522879
Match: 2qagC
Description: No description for 2qagC was found.

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Created and Maintained by: Michael Riffle