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View Structure Prediction Details

Protein: CE40711
Organism: Caenorhabditis elegans
Length: 248 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE40711.

Description E-value Query
Range
Subject
Range
CCDS12375.1_1 - null
gi|109123963 - gi|109123963|ref|XP_001115337.1| PREDICTED: pyroglutamyl-peptidase I [Macaca mulatta]
223.0 [0..42] [245..3]

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Predicted Domain #1
Region A:
Residues: [1-248]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTMTPVSDPI PIGNQEDKEN IEDAENTMNI SPACDRILVD HQYTRDVVIT AFDGQFEDLD  60
   61 YNPSSVVIDE LLKEEIENVR FTVHKFPVSY ETVAEKVPEL REKYPDEVLH LAAHSVKNRV 120
  121 LFEEKAFSDG YVKKDVNGFV PEGNTISSEN YEDADDRKSL KPFIDFDFLI EDVTEKCGLD 180
  181 GEKFGGLTVG KSQEPGRSVG GYLYYLSLRE RPINTLLIHI PPFEGECTKE AVTNVIREAI 240
  241 KFITINDF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.69897
Match: 1augA
Description: Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle