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View Structure Prediction Details

Protein: gi|9759494, gi|1...
Organism: Arabidopsis thaliana
Length: 306 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9759494, gi|1....

Description E-value Query
Range
Subject
Range
gi|109041778 - gi|109041778|ref|XP_001086442.1| PREDICTED: similar to CTD small phosphatase-like protein (CTDSP-lik...
261.0 [0..11] [265..482]

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Predicted Domain #1
Region A:
Residues: [1-66]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVMQQNLSV EPKSKKRKID SEINNSSSST NCDHFFVRYG ICCNCRSNVE RHRGRSFDYL  60
   61 VDGLQL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [67-306]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDIAVTVTKR VTTQITCFND KKLHLVLDLD HTLLHTVMIS NLTKEETYLI EEEDSREDLR  60
   61 RLNGGYSSEF LIKLRPFVHE FLKEANKMFS MYVYTMGDRD YAMNVLNLID PEKVYFGDRV 120
  121 ITRNESPYIK TLDLVLADEC GVVIVDDTPH VWPDHKRNLL EITKYNYFSD KTRHDVKYTK 180
  181 SYAEEKRDES RNDGSLANVL KVIKQVYEGF FSGGVEKDLD IDSKDVRLLL HDARRPKFYC 240
  241 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.154902
Match: 2hhlA
Description: No description for 2hhlA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle