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View Structure Prediction Details

Protein: PKP2_ARATH
Organism: Arabidopsis thaliana
Length: 579 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PKP2_ARATH.

Description E-value Query
Range
Subject
Range
gi|33875497 - gi|33875497|gb|AAH00481.2| PKM2 protein [Homo sapiens]
759.0 [0..31] [579..11]

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Predicted Domain #1
Region A:
Residues: [1-579]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQVVATRSI QGSMLSPNGG SVSTRSEKLL KPASFAVKVL GNEAKRSGRV SVRSRRVVDT  60
   61 TVRSARVETE VIPVSPEDVP NREEQLERLL EMQQFGDTSV GMWSKPTVRR KTKIVCTVGP 120
  121 STNTREMIWK LAEAGMNVAR MNMSHGDHAS HKKVIDLVKE YNAQTKDNTI AIMLDTKGPE 180
  181 VRSGDLPQPI MLDPGQEFTF TIERGVSTPS CVSVNYDDFV NDVEAGDMLL VDGGMMSFMV 240
  241 KSKTKDSVKC EVVDGGELKS RRHLNVRGKS ATLPSITEKD WEDIKFGVEN KVDFYAVSFV 300
  301 KDAQVVHELK KYLQNSGADI HVIVKIESAD SIPNLHSIIT ASDGAMVARG DLGAELPIEE 360
  361 VPILQEEIIN LCRSMGKAVI VATNMLESMI VHPTPTRAEV SDIAIAVREG ADAVMLSGET 420
  421 AHGKFPLKAA GVMHTVALRT EATITSGEMP PNLGQAFKNH MSEMFAYHAT MMSNTLGTST 480
  481 VVFTRTGFMA ILLSHYRPSG TIYAFTNEKK IQQRLALYQG VCPIYMEFTD DAEETFANAL 540
  541 ATLLKQGMVK KGEEIAIVQS GTQPIWRSQS THNIQVRKV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1t5aA
Description: Human Pyruvate Kinase M2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle