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View Structure Prediction Details

Protein: gi|7484960, gi|5...
Organism: Arabidopsis thaliana
Length: 513 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7484960, gi|5....

Description E-value Query
Range
Subject
Range
FP1_MYTCO - Adhesive plaque matrix protein OS=Mytilus coruscus GN=FP1 PE=2 SV=1
239.0 [0..5] [508..281]

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Predicted Domain #1
Region A:
Residues: [1-149]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVIRTSRTM GLGQCMVYVV VLSAIAATVT SYPYTSPQTP HYNSPSHEHK IPKYTPHPKP  60
   61 SIYSSSPPPS YYSPSPKVDY KSPPPSYVYS SPPPPYYSPS PKVDYKSLPP PYVYSSPPPP 120
  121 YYSPSPKVNY KSPPPPYVYS SPPPPYYSP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [150-347]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPKGDYKSPP PPYVYSSPPP PYYSPSPKVD YKSPPPPYVY SSPPPPYYSP TPKVDYKSPP  60
   61 PPYVYSSPPP PYYSPSPKVD YKSPPPPYVY SSPPPPYYSP SPKVNYKSPP PPYYRSPPPP 120
  121 YYSPSPKVDY KSPPPPYVYS SPPPPYYSPS PKVDYKSPPP PYVYSSPPPP YYSPTPKVDY 180
  181 KSPPPPYVYS SPPPPYYS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [348-513]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSPKVDYKSP PPPYVYSSPP PPYYSPSPKV DYKSPPPPYV YNSPPPPYYS PSPKVDYKSP  60
   61 PPPYIYNSPP PPYYSPSPKV NYKTPPPPYV YSSPPPPYYS PSPKVNYKSP PPPYVYSSPP 120
  121 PPYYSPSPNV DYKSPPPPYV YSSPPTPYYS PSSKVTYKSP PPPYVY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle