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View Structure Prediction Details

Protein: gi|7487902, gi|3...
Organism: Arabidopsis thaliana
Length: 413 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7487902, gi|3....

Description E-value Query
Range
Subject
Range
gi|52354239 - gi|52354239|gb|AAU44440.1| hypothetical protein AT1G79120 [Arabidopsis thaliana]
575.0 [0..1] [413..1]

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Predicted Domain #1
Region A:
Residues: [1-224]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKPLLYRRS SIFSVILRIH KLRETESFVL FPGESSSRLQ WTFVQVRHKS GGGGWRPKQK  60
   61 VYHRVHDLDK AIDLNKKPSL ILQLKSIIQA QKHGSLLLRD LEKHVGFVHK WNLMAAIEKY 120
  121 PTIFYVGGGH KEPPFVMLTE KAKKIAAEES EATESMEPIL VNNLRKLLMM SVDCRVPLEK 180
  181 VEFIQSAMGL PQDFKSTLIP KYTEFFSLKV INGKVNLVLE NWDS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [225-413]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLAITAREDR LSREGFSESV GDRKRVRITK DGNFLGRNAF KISFPPGFRP NASYLEEFEK  60
   61 WQKMEFPSPY LNARRFDAAD PKARKRVVAV LHELLSLTME KRVTCAQLDA FHSEYLLPSR 120
  121 LILCLIKHQG IFYITNKGAR GTVFLKDAYA GSNLIEKCPL LLFHDRFVAL CGRKEVNLSN 180
  181 EMQSSSVFS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle