Protein: | ATL61_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 204 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATL61_ARATH.
Description | E-value | Query Range |
Subject Range |
|
111.0 | [0..2] | [169..54] |
Region A: Residues: [1-80] |
1 11 21 31 41 51 | | | | | | 1 MKESDAVILI HLGINIVFAF FFFGISAVVV SCIIKCYNTH DDDHDHDNNN DGHVSITIKE 60 61 RVGIKPYVLR SIPIVDFNTK |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.416 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
View | Download | 0.408 | d.9.1 | Interleukin 8-like chemokines |
View | Download | 0.390 | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
View | Download | 0.382 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
View | Download | 0.380 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
Region A: Residues: [81-204] |
1 11 21 31 41 51 | | | | | | 1 DFKYVLECVV CLSELADGDK ARVLPSCDHW FHVECIDSWL QSNSTCPICR KRVCLKQSRT 60 61 RPELGGRDKS FNQNHDQTSE HHEFSTDPPT NTDTAIIEDG GCGEANEGQP ELTAVVIDIP 120 121 AKEI |
Detection Method: | ![]() |
Confidence: | 10.30103 |
Match: | 1iymA |
Description: | EL5 RING-H2 domain |
Matching Structure (courtesy of the PDB):![]() |
Term | Confidence | Notes |
binding | 0.0938889867773109 | bayes_pls_golite062009 |