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View Structure Prediction Details

Protein: CKX6_ARATH
Organism: Arabidopsis thaliana
Length: 504 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CKX6_ARATH.

Description E-value Query
Range
Subject
Range
gi|77953233, gi|... - gi|77953233|ref|ZP_00817643.1| conserved hypothetical protein [Marinobacter aquaeolei VT8], gi|77867...
333.0 [0..18] [497..1]

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Predicted Domain #1
Region A:
Residues: [1-504]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIVRSFTIL LLSCIAFKLA CCFSSSISSL KALPLVGHLE FEHVHHASKD FGNRYQLIPL  60
   61 AVLHPKSVSD IASTIRHIWM MGTHSQLTVA ARGRGHSLQG QAQTRHGIVI HMESLHPQKL 120
  121 QVYSVDSPAP YVDVSGGELW INILHETLKY GLAPKSWTDY LHLTVGGTLS NAGISGQAFR 180
  181 HGPQISNVHQ LEIVTGKGEI LNCTKRQNSD LFNGVLGGLG QFGIITRARI ALEPAPTMDQ 240
  241 EQLISAQGHK FDYIEGFVII NRTGLLNSWR LSFTAEEPLE ASQFKFDGRT LYCLELAKYL 300
  301 KQDNKDVINQ EVKETLSELS YVTSTLFTTE VAYEAFLDRV HVSEVKLRSK GQWEVPHPWL 360
  361 NLLVPRSKIN EFARGVFGNI LTDTSNGPVI VYPVNKSKWD NQTSAVTPEE EVFYLVAILT 420
  421 SASPGSAGKD GVEEILRRNR RILEFSEEAG IGLKQYLPHY TTREEWRSHF GDKWGEFVRR 480
  481 KSRYDPLAIL APGHRIFQKA VSYS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.39794
Match: 2exrA
Description: X-Ray Structure of Cytokinin Oxidase/Dehydrogenase (CKX) From Arabidopsis Thaliana AT5G21482
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle