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View Structure Prediction Details

Protein: gi|15242698, gi|...
Organism: Arabidopsis thaliana
Length: 217 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15242698, gi|....

Description E-value Query
Range
Subject
Range
gi|188036222, gi... - gi|188036222|pdb|3BBN|U Chain U, Homology Model For The Spinach Chloroplast 30s Subunit Fitted To 9....
136.0 [0..17] [134..32]

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Predicted Domain #1
Region A:
Residues: [1-217]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALESIVSLS ELLSSLLSSK PPSPSSLKPI TLPSSVSART SQHLSMTTKI LTAEHDDVIN  60
   61 RVAYPSLANA NLVFFKSSYY NVEVVPKDGE SEEQLVNDFK RSCFRAGVLQ ESRRRRFFES 120
  121 SLEKKTRKTK EAAKKYRKRS DFFFTFSSFF RKTLGEVESI DFDFTGDQTL NQNHYQLQRS 180
  181 ASTTEMHPEK TNKTITGNFL LRTLRFHIPT GLRSKPE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.522879
Match: 1vs5U
Description: No description for 1vs5U was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle