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View Structure Prediction Details

Protein: CHX19_ARATH
Organism: Arabidopsis thaliana
Length: 800 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for CHX19_ARATH.

Predicted Domain #1
Region A:
Residues: [1-454]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTNVTGQC PGPMKATSNG AFQNESPLDF ALPLIILQIV LVVVFTRLLA YFLKPLKQPR  60
   61 VIAEIIGGIL LGPSALGRSK AYLDTIFPKK SLTVLDTLAN IGLLFFLFLV GLELDFAAIK 120
  121 KTGKKSLLIA IAGISLPFIV GVGTSFVLSA TISKGVDQLP FIVFMGVALS ITAFPVLARI 180
  181 LAELKLLTTD IGRMAMSAAG VNDVAAWILL ALAIALSGDG TSPLVSVWVL LCGTGFVIFA 240
  241 VVAIKPLLAY MARRCPEGEP VKELYVCVTL TVVLAASFVT DTIGIHALFG AFVVGIVAPK 300
  301 EGPFCRILTE KIEDLVSGLL LPLYFAASGL KTDVTTIRGA QSWGLLVLVI LTTCFGKIVG 360
  361 TVGSSMLCKV PFREAVTLGF LMNTKGLVEL IVLNIGKDRK VLNDQAFAIL VLMALFTTFI 420
  421 TTPIVMLIYK PARKGAPYKH RTIQRKDHDS ELRI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.69897
Match: 1zcdA
Description: Crystal structure of the Na+/H+ antiporter NhaA
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [455-510]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LACFHSTRNI PTLINLIESS RGTGKKGRLC VYAMHLMELS ERSSAIAMVH KARNNG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [511-800]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPIWNKIERS TDQMVIAFEA YQHLRAVAVR PMTAISGLSS IHEDICTSAH QKRVAMILLP  60
   61 FHKHQRMDGA MESIGHRFHE VNQRVLQRAP CSVGILVDRG LGGTSQVVAS EVAYKVVIPF 120
  121 FGGLDDREAL AYGMKMVEHP GITLTVYKFV AARGTLKRFE KSEHDEKEKK EKETDEEFVR 180
  181 ELMNDPRGNE SLAYEERVVE SKDDIIATLK SMSKCNLFVV GRNAAVASLV KSTDCPELGP 240
  241 VGRLLSSSEF STTASVLVVQ GYDPAADTRP LVEEDAEYDQ SSRDISDLTA 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.39794
Match: 2jaxA
Description: No description for 2jaxA was found.

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